Usage
"plot"(x, fit = x, obs_vars = names(fit$mkinmod$map), xlab = "Time", ylab = "Observed", xlim = range(fit$data$time), ylim = "default", col_obs = 1:length(fit$mkinmod$map), pch_obs = col_obs, lty_obs = rep(1, length(fit$mkinmod$map)), add = FALSE, legend = !add, show_residuals = FALSE, maxabs = "auto", lpos = "topright", inset = c(0.05, 0.05), ...)
Arguments
 x

Alias for fit introduced for compatibility with the generic S3 method.
 fit

an object of class
mkinfit
.
 obs_vars

A character vector of names of the observed variables for which the
data and the model should be plotted. Defauls to all observed variables
in the model.
 xlab

label for the x axis.
 ylab

label for the y axis.
 xlim

plot range in x direction.
 ylim

plot range in y direction.
 col_obs

colors used for plotting the observed data and the corresponding model prediction lines.
 pch_obs

symbols to be used for plotting the data.
 lty_obs

line types to be used for the model predictions.
 add

should the plot be added to an existing plot?
 legend

should a legend be added to the plot?
 show_residuals

should residuals be shown in the lower third of the plot?
 maxabs

Maximum absolute value of the residuals. This is used for the scaling of
the y axis and defaults to "auto".
 lpos

position of the legend. Passed to
legend
as the first argument.
 inset

Passed to
legend
if applicable.
 ...

further arguments passed to
plot
.
Description
Solves the differential equations with the optimised and fixed parameters
from a previous successful call to mkinfit
and plots
the observed data together with the solution of the fitted model.
Value
The function is called for its side effect.
Examples
# One parent compound, one metabolite, both single first order, path from
# parent to sink included
SFO_SFO < mkinmod(parent = mkinsub("SFO", "m1", full = "Parent"),
m1 = mkinsub("SFO", full = "Metabolite M1" ))
Successfully compiled differential equation model from autogenerated C code.
fit < mkinfit(SFO_SFO, FOCUS_2006_D, quiet = TRUE)
plot(fit)